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Semantic Software Lab
Concordia University
Montréal, Canada

Publications from the Semantic Software Lab

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adaptive hypermedia
Bakalov, F., M. - J. Meurs, B. König-Ries, B. Sateli, R. Witte, G. Butler, and A. Tsang, "An Approach to Controlling User Models and Personalization Effects in Recommender Systems", International Conference on Intelligent User Interfaces (IUI '13), Santa Monica, CA, USA : ACM, pp. 49–56, 03/2013. Abstract  Download: iui13.pdf (420.74 KB)
Artificial Believer
Krestel, R., S. Bergler, and R. Witte, "Modeling human newspaper readers: The Fuzzy Believer approach", Natural Language Engineering, vol. 20, no. 02, pp. 261–288, April 2014. Abstract  Download: nle_fuzzy_believer.pdf (313.8 KB)
Automated quality analysis
Automated Reasoning
Zhang, Y., R. Witte, J. Rilling, and V. Haarslev, "Ontology-based Program Comprehension Tool Supporting Website Architectural Evolution", Eighth IEEE International Symposium on Web Site Evolution (WSE 2006), Philadelphia, PA, USA : IEEE, pp. 41–49, September 23–24, 2006. Abstract  Download: Zhang_etal-WSE2006.pdf (307.26 KB)
automated reasoning in bioinformatics
Witte, R., T. Kappler, and C. J. O. Baker, "Enhanced semantic access to the protein engineering literature using ontologies populated by text mining", Int.\ J.\ Bioinformatics Research and Applications (IJBRA), vol. 3, no. 3, pp. 389–413, 2007. Abstract  Download: witte_etal_ijbra2007.pdf (376.3 KB)
Biodiversity
Specht, G., H. Gamper, and F. Klan (Eds.), Löffler, F., B. Sateli, R. Witte, and B. König-Ries, "Towards Semantic Recommendation of Biodiversity Datasets based on Linked Open Data", The 26th GI-Workshop on Foundations of Databases (Grundlagen von Datenbanken), vol. 1313, Bozen, Italy : CEUR-WS.org, pp. 65–70, 10/2014. Abstract  Download: Loeffler_GvDB2014.pdf (1.68 MB)
Biofuel Research
Meurs, M. - J., C. Murphy, N. Naderi, I. Morgenstern, C. Cantu, S. Semarjit, G. Butler, J. Powlowski, A. Tsang, and R. Witte, "Towards Evaluating the Impact of Semantic Support for Curating the Fungus Scientific Literature", The 3rd Canadian Semantic Web Symposium (CSWS2011) , vol. 774 , Vancouver, British Columbia, Canada , 08/2011. Abstract  Download: mushmancsws2011.pdf (267.44 KB)
biology and genetics experimentation
Ananiadou, S., D. Lee, S. Navathe, and M. Song (Eds.), Meurs, M. - J., C. Murphy, I. Morgenstern, N. Naderi, G. Butler, J. Powlowski, A. Tsang, and R. Witte, "Semantic Text Mining for Lignocellulose Research", The ACM Fifth International Workshop on Data and Text Mining in Biomedical Informatics in conjunction with CIKM, Glasgow, UK : ACM New York, NY, USA ©2011, 10/2011. Abstract  Download: dtmbio2011_talk.pdf (1.22 MB); dtmbio2011_authorsversion.pdf (667.39 KB)
Biphenyl dioxygenase
Baker, C. J. O., and R. Witte, "Mutation mining–A prospector's tale", Information Systems Frontiers (ISF), vol. 8, no. 1, pp. 47–57, February, 2006. Abstract
CSWS2013
Witte, R., C. J. O. Baker, G. Butler, and M. Dumontier (Eds.), "Proceedings of the 4th Canadian Semantic Web Symposium (CSWS 2013)", 4th Canadian Semantic Web Symposium (CSWS 2013), vol. 1054, Montréal, QC, Canada : CEUR-WS.org, 06/2011, 2013.  Download: CSWS2013-complete.pdf (7.49 MB)
cultural heritage data management
Witte, R., R. Krestel, T. Kappler, and P. C. Lockemann, "Converting a Historical Architecture Encyclopedia into a Semantic Knowledge Base", IEEE Intelligent Systems, vol. 25, no. 1, Los Alamitos, CA, USA : IEEE Computer Society, pp. 58--66, January/February, 2010. Abstract  Download: ieee-is-durm.pdf (1.61 MB)
Data mining
Baker, C. J. O., and R. Witte, "Mutation mining–A prospector's tale", Information Systems Frontiers (ISF), vol. 8, no. 1, pp. 47–57, February, 2006. Abstract
description logics
Witte, R., T. Kappler, and C. J. O. Baker, "Enhanced semantic access to the protein engineering literature using ontologies populated by text mining", Int.\ J.\ Bioinformatics Research and Applications (IJBRA), vol. 3, no. 3, pp. 389–413, 2007. Abstract  Download: witte_etal_ijbra2007.pdf (376.3 KB)
Design
Witte, R., and T. Gitzinger, "Connecting Wikis and Natural Language Processing Systems", WikiSym '07: Proceedings of the 2007 International Symposium on Wikis, Montréal, Canada : ACM, pp. 165–176, October 21--23, 2007. Abstract
Digital Libraries
Sateli, B., and R. Witte, "Automatic Construction of a Semantic Knowledge Base from CEUR Workshop Proceedings", The 12th Extended Semantic Web Conference (The Semantic Publishing Challenge 2015), vol. 548, Portoroz, Slovenia : Springer, pp. 129–141, 06/2015. Abstract  Download: sempub2015_poster.pdf (1.52 MB); sempub_challenge2015.pdf (903.62 KB)
Durm
Witte, R., R. Krestel, T. Kappler, and P. C. Lockemann, "Converting a Historical Architecture Encyclopedia into a Semantic Knowledge Base", IEEE Intelligent Systems, vol. 25, no. 1, Los Alamitos, CA, USA : IEEE Computer Society, pp. 58--66, January/February, 2010. Abstract  Download: ieee-is-durm.pdf (1.61 MB)
Eclipse
Butz, C., and P. Lingras (Eds.), Witte, R., B. Sateli, N. Khamis, and J. Rilling, "Intelligent Software Development Environments: Integrating Natural Language Processing with the Eclipse Platform", 24th Canadian Conference on Artificial Intelligence (Canadian AI 2011), vol. 6657, St. John's, Newfoundland and Labrador, Canada : Springer-Verlag, pp. 408–419, May 25–27, 2011. Abstract  Download: cai11-saeclipse.pdf (429.57 KB)
Extrinsic Evaluation
Meurs, M. - J., C. Murphy, N. Naderi, I. Morgenstern, C. Cantu, S. Semarjit, G. Butler, J. Powlowski, A. Tsang, and R. Witte, "Towards Evaluating the Impact of Semantic Support for Curating the Fungus Scientific Literature", The 3rd Canadian Semantic Web Symposium (CSWS2011) , vol. 774 , Vancouver, British Columbia, Canada , 08/2011. Abstract  Download: mushmancsws2011.pdf (267.44 KB)
fuzzy belief revision
Witte, R., "Fuzzy Belief Revision", 9th International Workshop on Non-Monotonic Reasoning (NMR 2002), Toulouse, France, pp. 311–320, April 19–21, 2002. Abstract  Download: witte_fuzzybeliefrevision.pdf (131.43 KB)
Fuzzy Believer
Krestel, R., S. Bergler, and R. Witte, "Modeling human newspaper readers: The Fuzzy Believer approach", Natural Language Engineering, vol. 20, no. 02, pp. 261–288, April 2014. Abstract  Download: nle_fuzzy_believer.pdf (313.8 KB)
fuzzy information systems
Witte, R., "Fuzzy Belief Revision", 9th International Workshop on Non-Monotonic Reasoning (NMR 2002), Toulouse, France, pp. 311–320, April 19–21, 2002. Abstract  Download: witte_fuzzybeliefrevision.pdf (131.43 KB)
Fuzzy NLP
Krestel, R., S. Bergler, and R. Witte, "Modeling human newspaper readers: The Fuzzy Believer approach", Natural Language Engineering, vol. 20, no. 02, pp. 261–288, April 2014. Abstract  Download: nle_fuzzy_believer.pdf (313.8 KB)
fuzzy object-oriented data model
Witte, R., "Fuzzy Belief Revision", 9th International Workshop on Non-Monotonic Reasoning (NMR 2002), Toulouse, France, pp. 311–320, April 19–21, 2002. Abstract  Download: witte_fuzzybeliefrevision.pdf (131.43 KB)
GATE Components
Witte, R., N. Khamis, and J. Rilling, "Flexible Ontology Population from Text: The OwlExporter", International Conference on Language Resources and Evaluation (LREC), Valletta, Malta : ELRA, pp. 3845--3850, May 19--21, 2010. Abstract  Download: lrec2010-owlexporterV2.pdf (477.58 KB)
Krestel, R., R. Witte, and S. Bergler, "Predicate-Argument EXtractor (PAX)", New Challenges for NLP Frameworks, Valletta, Malta : ELRA, pp. 51--54, May 22, 2010. Abstract  Download: lrec2010-pax.pdf (405.72 KB)
Haloalkane dehalogenase
Baker, C. J. O., and R. Witte, "Mutation mining–A prospector's tale", Information Systems Frontiers (ISF), vol. 8, no. 1, pp. 47–57, February, 2006. Abstract
Handbook on Architecture
Witte, R., R. Krestel, T. Kappler, and P. C. Lockemann, "Converting a Historical Architecture Encyclopedia into a Semantic Knowledge Base", IEEE Intelligent Systems, vol. 25, no. 1, Los Alamitos, CA, USA : IEEE Computer Society, pp. 58--66, January/February, 2010. Abstract  Download: ieee-is-durm.pdf (1.61 MB)
Handbuch der Architektur
Witte, R., R. Krestel, T. Kappler, and P. C. Lockemann, "Converting a Historical Architecture Encyclopedia into a Semantic Knowledge Base", IEEE Intelligent Systems, vol. 25, no. 1, Los Alamitos, CA, USA : IEEE Computer Society, pp. 58--66, January/February, 2010. Abstract  Download: ieee-is-durm.pdf (1.61 MB)
Human Factors
Witte, R., and T. Gitzinger, "Connecting Wikis and Natural Language Processing Systems", WikiSym '07: Proceedings of the 2007 International Symposium on Wikis, Montréal, Canada : ACM, pp. 165–176, October 21--23, 2007. Abstract
Javadoc Ontology
Knowledge Base
Sateli, B., and R. Witte, "Automatic Construction of a Semantic Knowledge Base from CEUR Workshop Proceedings", The 12th Extended Semantic Web Conference (The Semantic Publishing Challenge 2015), vol. 548, Portoroz, Slovenia : Springer, pp. 129–141, 06/2015. Abstract  Download: sempub2015_poster.pdf (1.52 MB); sempub_challenge2015.pdf (903.62 KB)
knowledge base management
Witte, R., R. Krestel, T. Kappler, and P. C. Lockemann, "Converting a Historical Architecture Encyclopedia into a Semantic Knowledge Base", IEEE Intelligent Systems, vol. 25, no. 1, Los Alamitos, CA, USA : IEEE Computer Society, pp. 58--66, January/February, 2010. Abstract  Download: ieee-is-durm.pdf (1.61 MB)
Knowledge Management
Sateli, B., and R. Witte, "Collaborative Semantic Management and Automated Analysis of Scientific Literature", The 11th Extended Semantic Web Conference (ESWC 2014), vol. 8798, Anissaras, Crete, Greece : Springer, pp. 494-498, 05/2014. Abstract  Download: zeeva-eswc14.pdf (311.49 KB)
Languages
Witte, R., and T. Gitzinger, "Connecting Wikis and Natural Language Processing Systems", WikiSym '07: Proceedings of the 2007 International Symposium on Wikis, Montréal, Canada : ACM, pp. 165–176, October 21--23, 2007. Abstract
Liferay
Löffler, F., B. Sateli, B. König-Ries, and R. Witte, "Semantic Content Processing in Web Portals", 4th Canadian Semantic Web Symposium (CSWS 2013), vol. 1054, Montréal, QC, Canada : CEUR-WS.org, pp. 50–51, 07/2013. Abstract  Download: paper-12.pdf (217.15 KB)
lignocellulose research
Ananiadou, S., D. Lee, S. Navathe, and M. Song (Eds.), Meurs, M. - J., C. Murphy, I. Morgenstern, N. Naderi, G. Butler, J. Powlowski, A. Tsang, and R. Witte, "Semantic Text Mining for Lignocellulose Research", The ACM Fifth International Workshop on Data and Text Mining in Biomedical Informatics in conjunction with CIKM, Glasgow, UK : ACM New York, NY, USA ©2011, 10/2011. Abstract  Download: dtmbio2011_talk.pdf (1.22 MB); dtmbio2011_authorsversion.pdf (667.39 KB)
Linked Open Data
Sateli, B., and R. Witte, "What's in this paper? Combining Rhetorical Entities with Linked Open Data for Semantic Literature Querying", Semantics, Analytics, Visualisation: Enhancing Scholarly Data (SAVE-SD 2015), Florence, Italy : ACM, pp. 1023–1028, 05/2015. Abstract
Specht, G., H. Gamper, and F. Klan (Eds.), Löffler, F., B. Sateli, R. Witte, and B. König-Ries, "Towards Semantic Recommendation of Biodiversity Datasets based on Linked Open Data", The 26th GI-Workshop on Foundations of Databases (Grundlagen von Datenbanken), vol. 1313, Bozen, Italy : CEUR-WS.org, pp. 65–70, 10/2014. Abstract  Download: Loeffler_GvDB2014.pdf (1.68 MB)
Gonzalez-Beltran, A., F. Osborne, and S. Peroni (Eds.), Sateli, B., F. Löffler, B. König-Ries, and R. Witte, "Semantic User Profiles: Learning Scholars' Competences by Analyzing their Publications", Semantics, Analytics, Visualisation: Enhancing Scholarly Data (SAVE-SD 2016), vol. 9792, Montreal, QC, Canada : Springer International Publishing, 04/2016. Abstract  Download: savesd16.pdf (481.69 KB)
Sateli, B., and R. Witte, "From Papers to Triples: An Open Source Workflow for Semantic Publishing Experiments", Semantics, Analytics, Visualisation: Enhancing Scholarly Data (SAVE-SD 2016), Montréal, QC, Canada : Springer, 04/2016. Abstract  Download: savesd16-demo.pdf (908.21 KB)
Literature Management
Sateli, B., and R. Witte, "Semantic MediaWiki (SMW) for Scientific Literature Management", The 9th Semantic MediaWiki Conference (SMWCon Spring 2014), Montréal, Canada, 05/2014. Abstract  Download: zeeva-smwcon14-talk.pdf (1.07 MB)
Witte, R., and B. Sateli, "Adding Natural Language Processing Support to your (Semantic) MediaWiki", The 9th Semantic MediaWiki Conference (SMWCon Spring 2014), Montreal, Canada, 05/2014.  Download: wiki-nlp-tutorial-smwcon2014.pdf (3.1 MB)
mutation extraction systems; mutation evaluation tasks; mutation evaluation metrics
Witte, R., and C. J. O. Baker, "Towards A Systematic Evaluation of Protein Mutation Extraction Systems", Journal of Bioinformatics and Computational Biology (JBCB), vol. 5, no. 6, pp. 1339–1359, December, 2007. Abstract  Download: witte_baker_jbcb2007.pdf (248.69 KB)
natural language processing
Sateli, B., and R. Witte, "From Papers to Triples: An Open Source Workflow for Semantic Publishing Experiments", Semantics, Analytics, Visualisation: Enhancing Scholarly Data (SAVE-SD 2016), Montréal, QC, Canada : Springer, 04/2016. Abstract  Download: savesd16-demo.pdf (908.21 KB)
Sateli, B., and R. Witte, "Collaborative Semantic Management and Automated Analysis of Scientific Literature", The 11th Extended Semantic Web Conference (ESWC 2014), vol. 8798, Anissaras, Crete, Greece : Springer, pp. 494-498, 05/2014. Abstract  Download: zeeva-eswc14.pdf (311.49 KB)
Sateli, B., E. Angius, S. S. Rajivelu, and R. Witte, "Can Text Mining Assistants Help to Improve Requirements Specifications?", Mining Unstructured Data (MUD 2012), Kingston, Ontario, Canada, October 17, 2012. Abstract  Download: mud2012-ReqWiki.pdf (375.44 KB)
Sateli, B., and R. Witte, "Automatic Construction of a Semantic Knowledge Base from CEUR Workshop Proceedings", The 12th Extended Semantic Web Conference (The Semantic Publishing Challenge 2015), vol. 548, Portoroz, Slovenia : Springer, pp. 129–141, 06/2015. Abstract  Download: sempub2015_poster.pdf (1.52 MB); sempub_challenge2015.pdf (903.62 KB)
Witte, R., R. Krestel, T. Kappler, and P. C. Lockemann, "Converting a Historical Architecture Encyclopedia into a Semantic Knowledge Base", IEEE Intelligent Systems, vol. 25, no. 1, Los Alamitos, CA, USA : IEEE Computer Society, pp. 58--66, January/February, 2010. Abstract  Download: ieee-is-durm.pdf (1.61 MB)