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Semantic Software Lab
Concordia University
Montréal, Canada

Bioinformatics

Combining Biological Databases and Text Mining to support New Bioinformatics Applications

Witte, R., and C. J. O. Baker, "Combining Biological Databases and Text Mining to support New Bioinformatics Applications", Natural Language Processing and Information Systems: 10th International Conference on Applications of Natural Language to Information Systems (NLDB 2005), vol. 3513, Alicante, Spain : Springer-Verlag, pp. 310–321, June 15–17, 2005.

Ontology-Based Extraction and Summarization of Protein Mutation Impact Information

Naderi, N., and R. Witte, "Ontology-Based Extraction and Summarization of Protein Mutation Impact Information", Proceedings of the 2010 Workshop on Biomedical Natural Language Processing (BioNLP 2010), Uppsala, Sweden : Association for Computational Linguistics (ACL), pp. 128--129, July 15, 2010.

Open Mutation Miner (OMM) Project

In the Open Mutation Miner (OMM) project we investigate the combination of NLP, ontologies, and bioinformatics tools for the extraction and analysis of mutations and their impacts from the bibliome.

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