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Concordia University
Montréal, Canada

OMM mutation and OMM impacts

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Hi,
Are the two applications (OMM Mutation and OMM Impacts) related, i.e, do I need to run the mutation then the impact?

I ran OMM Impacts on corpus with one document (xyz.txt), I see it is processing that but don't know where to find the output!
Thanks

rene's picture

OMM Impacts includes OMM Mutations

Hi,

The OMM Impacts pipeline includes the mutation analysis, i.e., you can run it as a self-contained pipeline. OMM Mutations is provided as a simpler pipeline for those who are only interested in the mutation entities, but not the impact analysis.

Regarding the output, it seems you are not familiar with GATE annotations and the GATE Developer GUI, please follow the recommendations posted in this thread regarding the GATE documentation.

Best, René