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Semantic Software Lab
Concordia University
Montréal, Canada

Publications from the Semantic Software Lab

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Xylanase
Baker, C. J. O., and R. Witte, "Mutation mining–A prospector's tale", Information Systems Frontiers (ISF), vol. 8, no. 1, pp. 47–57, February, 2006. Abstract
Baker, C. J. O., and R. Witte, "Enriching Protein Structure Visualizations with Mutation Annotations Obtained by Text Mining Protein Engineering Literature", The 3rd Canadian Working Conference on Computational Biology (CCCB'04), Markham, Ontario, Canada, October 4, 2004. Abstract  Download: baker_witte_cccb04.pdf (272.1 KB)
Wiki/NLP Integration
Witte, R., and T. Gitzinger, "Connecting Wikis and Natural Language Processing Systems", WikiSym '07: Proceedings of the 2007 International Symposium on Wikis, Montréal, Canada : ACM, pp. 165–176, October 21--23, 2007. Abstract
User Profiling
Gonzalez-Beltran, A., F. Osborne, and S. Peroni (Eds.), Sateli, B., F. Löffler, B. König-Ries, and R. Witte, "Semantic User Profiles: Learning Scholars' Competences by Analyzing their Publications", Semantics, Analytics, Visualisation: Enhancing Scholarly Data (SAVE-SD 2016), vol. 9792, Montreal, QC, Canada : Springer International Publishing, 04/2016. Abstract  Download: savesd16.pdf (481.69 KB)
user modeling
Bakalov, F., M. - J. Meurs, B. König-Ries, B. Sateli, R. Witte, G. Butler, and A. Tsang, "An Approach to Controlling User Models and Personalization Effects in Recommender Systems", International Conference on Intelligent User Interfaces (IUI '13), Santa Monica, CA, USA : ACM, pp. 49–56, 03/2013. Abstract  Download: iui13.pdf (420.74 KB)
usability
Bakalov, F., M. - J. Meurs, B. König-Ries, B. Sateli, R. Witte, G. Butler, and A. Tsang, "An Approach to Controlling User Models and Personalization Effects in Recommender Systems", International Conference on Intelligent User Interfaces (IUI '13), Santa Monica, CA, USA : ACM, pp. 49–56, 03/2013. Abstract  Download: iui13.pdf (420.74 KB)
Traceability
Rilling, J., Y. Zhang, W. J. Meng, R. Witte, V. Haarslev, and P. Charland, "A Unified Ontology-Based Process Model for Software Maintenance and Comprehension", Models in Software Engineering: Workshops and Symposia at MoDELS 2006, Genoa, Italy, October 1-6, 2006, Reports and Revised Selected Papers, vol. 4364, Genoa, Italy : Springer Berlin/Heidelberg, pp. 56–65, 2007. Abstract  Download: Rilling_etal-MoDELS2006.pdf (253.17 KB)
Rilling, J., R. Witte, and Y. Zhang, "Automatic Traceability Recovery: An Ontological Approach", International Symposium on Grand Challenges in Traceability (GCT'07), Lexington, Kentucky, USA : Center of Excellence in Traceability, March 22–23, 2007. Abstract
Zhang, Y., R. Witte, J. Rilling, and V. Haarslev, "An Ontology-based Approach for the Recovery of Traceability Links", 3rd International Workshop on Metamodels, Schemas, Grammars, and Ontologies for Reverse Engineering (ATEM 2006), Genoa, Italy, October 1st, 2006. Abstract  Download: Zhang_etal-ATEM2006.pdf (375 KB)
Textual Entailment Recognition
Krestel, R., S. Bergler, and R. Witte, "Modeling human newspaper readers: The Fuzzy Believer approach", Natural Language Engineering, vol. 20, no. 02, pp. 261–288, April 2014. Abstract  Download: nle_fuzzy_believer.pdf (313.8 KB)
text mining
Zhang, Y., R. Witte, J. Rilling, and V. Haarslev, "An Ontology-based Approach for the Recovery of Traceability Links", 3rd International Workshop on Metamodels, Schemas, Grammars, and Ontologies for Reverse Engineering (ATEM 2006), Genoa, Italy, October 1st, 2006. Abstract  Download: Zhang_etal-ATEM2006.pdf (375 KB)
Baker, C. J. O., and K. - H. Cheung (Eds.), Witte, R., T. Kappler, and C. J. O. Baker, "Ontology Design for Biomedical Text Mining", Semantic Web: Revolutionizing Knowledge Discovery in the Life Sciences, New York, NY, USA : Springer Science+Business Media, pp. 281–313, 2007. Abstract  Download: ontology_design_preprint.pdf (811.59 KB)
Rilling, J., Y. Zhang, W. J. Meng, R. Witte, V. Haarslev, and P. Charland, "A Unified Ontology-Based Process Model for Software Maintenance and Comprehension", Models in Software Engineering: Workshops and Symposia at MoDELS 2006, Genoa, Italy, October 1-6, 2006, Reports and Revised Selected Papers, vol. 4364, Genoa, Italy : Springer Berlin/Heidelberg, pp. 56–65, 2007. Abstract  Download: Rilling_etal-MoDELS2006.pdf (253.17 KB)
Gonzalez-Beltran, A., F. Osborne, and S. Peroni (Eds.), Sateli, B., F. Löffler, B. König-Ries, and R. Witte, "Semantic User Profiles: Learning Scholars' Competences by Analyzing their Publications", Semantics, Analytics, Visualisation: Enhancing Scholarly Data (SAVE-SD 2016), vol. 9792, Montreal, QC, Canada : Springer International Publishing, 04/2016. Abstract  Download: savesd16.pdf (481.69 KB)
Baker, C. J. O., and R. Witte, "Mutation mining–A prospector's tale", Information Systems Frontiers (ISF), vol. 8, no. 1, pp. 47–57, February, 2006. Abstract
Franconi, E., M. Kifer, and W. May (Eds.), Witte, R., Y. Zhang, and J. Rilling, "Empowering Software Maintainers with Semantic Web Technologies", 4th European Semantic Web Conference (ESWC 2007), no. 4519, Innsbruck, Austria : Springer-Verlag Berlin Heidelberg, pp. 37–52, June 3–7, 2007. Abstract  Download: eswc07-witte.pdf (689.81 KB)
Sateli, B., and R. Witte, "Automatic Construction of a Semantic Knowledge Base from CEUR Workshop Proceedings", The 12th Extended Semantic Web Conference (The Semantic Publishing Challenge 2015), vol. 548, Portoroz, Slovenia : Springer, pp. 129–141, 06/2015. Abstract  Download: sempub2015_poster.pdf (1.52 MB); sempub_challenge2015.pdf (903.62 KB)
Witte, R., T. Kappler, and C. J. O. Baker, "Enhanced semantic access to the protein engineering literature using ontologies populated by text mining", Int.\ J.\ Bioinformatics Research and Applications (IJBRA), vol. 3, no. 3, pp. 389–413, 2007. Abstract  Download: witte_etal_ijbra2007.pdf (376.3 KB)
Witte, R., R. Krestel, T. Kappler, and P. C. Lockemann, "Converting a Historical Architecture Encyclopedia into a Semantic Knowledge Base", IEEE Intelligent Systems, vol. 25, no. 1, Los Alamitos, CA, USA : IEEE Computer Society, pp. 58--66, January/February, 2010. Abstract  Download: ieee-is-durm.pdf (1.61 MB)
Sateli, B., and R. Witte, "Collaborative Semantic Management and Automated Analysis of Scientific Literature", The 11th Extended Semantic Web Conference (ESWC 2014), vol. 8798, Anissaras, Crete, Greece : Springer, pp. 494-498, 05/2014. Abstract  Download: zeeva-eswc14.pdf (311.49 KB)
Baker, C. J. O., and R. Witte, "Enriching Protein Structure Visualizations with Mutation Annotations Obtained by Text Mining Protein Engineering Literature", The 3rd Canadian Working Conference on Computational Biology (CCCB'04), Markham, Ontario, Canada, October 4, 2004. Abstract  Download: baker_witte_cccb04.pdf (272.1 KB)
Ananiadou, S., D. Lee, S. Navathe, and M. Song (Eds.), Meurs, M. - J., C. Murphy, I. Morgenstern, N. Naderi, G. Butler, J. Powlowski, A. Tsang, and R. Witte, "Semantic Text Mining for Lignocellulose Research", The ACM Fifth International Workshop on Data and Text Mining in Biomedical Informatics in conjunction with CIKM, Glasgow, UK : ACM New York, NY, USA ©2011, 10/2011. Abstract  Download: dtmbio2011_talk.pdf (1.22 MB); dtmbio2011_authorsversion.pdf (667.39 KB)
text analysis
Ananiadou, S., D. Lee, S. Navathe, and M. Song (Eds.), Meurs, M. - J., C. Murphy, I. Morgenstern, N. Naderi, G. Butler, J. Powlowski, A. Tsang, and R. Witte, "Semantic Text Mining for Lignocellulose Research", The ACM Fifth International Workshop on Data and Text Mining in Biomedical Informatics in conjunction with CIKM, Glasgow, UK : ACM New York, NY, USA ©2011, 10/2011. Abstract  Download: dtmbio2011_talk.pdf (1.22 MB); dtmbio2011_authorsversion.pdf (667.39 KB)
SVM Classifier
Rashwan, A., O. Ormandjieva, and R. Witte, "Ontology-Based Classification of Non-Functional Requirements in Software Specifications: A new Corpus and SVM-Based Classifier", The 37th Annual International Computer Software & Applications Conference (COMPSAC 2013), Kyoto, Japan : IEEE, pp. 381–386, 07/2013. Abstract  Download: reqsem-compsac13-IEEE.pdf (214.73 KB)
story metaphor
Meng, W. J., J. Rilling, Y. Zhang, R. Witte, S. Mudur, and P. Charland, "A Context-Driven Software Comprehension Process Model", Second International IEEE Workshop on Software Evolvability (SE 2006), Philadelphia, PA, USA : IEEE, pp. 50–57, September 24, 2006. Abstract  Download: Meng_etal-SE2006.pdf (253.97 KB)
Source code comments
Software Traceability
Angius, E., and R. Witte, "OpenTrace: an Open Source Workbench for Automatic Software Traceability Link Recovery", 19th Working Conference on Reverse Engineering (WCRE 2012), Kingston, Ontario, Canada : IEEE Computer Society, pp. 507–508, October 15-18, 2012. Abstract  Download: WCRE2012-OpenTrace.pdf (227.65 KB)
Software Requirements Engineering
Rashwan, A., O. Ormandjieva, and R. Witte, "Ontology-Based Classification of Non-Functional Requirements in Software Specifications: A new Corpus and SVM-Based Classifier", The 37th Annual International Computer Software & Applications Conference (COMPSAC 2013), Kyoto, Japan : IEEE, pp. 381–386, 07/2013. Abstract  Download: reqsem-compsac13-IEEE.pdf (214.73 KB)
Software Maintenance
Franconi, E., M. Kifer, and W. May (Eds.), Witte, R., Y. Zhang, and J. Rilling, "Empowering Software Maintainers with Semantic Web Technologies", 4th European Semantic Web Conference (ESWC 2007), no. 4519, Innsbruck, Austria : Springer-Verlag Berlin Heidelberg, pp. 37–52, June 3–7, 2007. Abstract  Download: eswc07-witte.pdf (689.81 KB)
Meng, W. J., J. Rilling, Y. Zhang, R. Witte, and P. Charland, "An Ontological Software Comprehension Process Model", 3rd International Workshop on Metamodels, Schemas, Grammars, and Ontologies for Reverse Engineering (ATEM 2006), Genoa, Italy, October 1st, 2006. Abstract  Download: Meng_etal-ATEM2006.pdf (567.3 KB)
Rilling, J., Y. Zhang, W. J. Meng, R. Witte, V. Haarslev, and P. Charland, "A Unified Ontology-Based Process Model for Software Maintenance and Comprehension", Models in Software Engineering: Workshops and Symposia at MoDELS 2006, Genoa, Italy, October 1-6, 2006, Reports and Revised Selected Papers, vol. 4364, Genoa, Italy : Springer Berlin/Heidelberg, pp. 56–65, 2007. Abstract  Download: Rilling_etal-MoDELS2006.pdf (253.17 KB)
Rilling, J., R. Witte, and Y. Zhang, "Automatic Traceability Recovery: An Ontological Approach", International Symposium on Grand Challenges in Traceability (GCT'07), Lexington, Kentucky, USA : Center of Excellence in Traceability, March 22–23, 2007. Abstract
Software Evolution
Meng, W. J., J. Rilling, Y. Zhang, R. Witte, S. Mudur, and P. Charland, "A Context-Driven Software Comprehension Process Model", Second International IEEE Workshop on Software Evolvability (SE 2006), Philadelphia, PA, USA : IEEE, pp. 50–57, September 24, 2006. Abstract  Download: Meng_etal-SE2006.pdf (253.97 KB)
Schugerl, P., J. Rilling, R. Witte, and P. Charland, "A Quality Perspective of Software Evolvability Using Semantic Analysis", Third IEEE International Conference on Semantic Computing (ICSC 2009), Berkeley, CA, USA : IEEE Computer Society, pp. 420--427, September 14--16, 2009. Abstract  Download: evolvability-icsc2009.pdf (815.06 KB)
Zhang, Y., R. Witte, J. Rilling, and V. Haarslev, "Ontology-based Program Comprehension Tool Supporting Website Architectural Evolution", Eighth IEEE International Symposium on Web Site Evolution (WSE 2006), Philadelphia, PA, USA : IEEE, pp. 41–49, September 23–24, 2006. Abstract  Download: Zhang_etal-WSE2006.pdf (307.26 KB)
Software Engineering
Schugerl, P., J. Rilling, R. Witte, and P. Charland, "A Quality Perspective of Software Evolvability Using Semantic Analysis", Third IEEE International Conference on Semantic Computing (ICSC 2009), Berkeley, CA, USA : IEEE Computer Society, pp. 420--427, September 14--16, 2009. Abstract  Download: evolvability-icsc2009.pdf (815.06 KB)
Khamis, N., R. Witte, and J. Rilling, "Generating an NLP Corpus from Java Source Code: The SSL Javadoc Doclet", New Challenges for NLP Frameworks, Valletta, Malta : ELRA, pp. 41–45, May 22, 2010. Abstract  Download: nlpf2010-ssldoclet.pdf (436.13 KB)
software comprehension
Rilling, J., Y. Zhang, W. J. Meng, R. Witte, V. Haarslev, and P. Charland, "A Unified Ontology-Based Process Model for Software Maintenance and Comprehension", Models in Software Engineering: Workshops and Symposia at MoDELS 2006, Genoa, Italy, October 1-6, 2006, Reports and Revised Selected Papers, vol. 4364, Genoa, Italy : Springer Berlin/Heidelberg, pp. 56–65, 2007. Abstract  Download: Rilling_etal-MoDELS2006.pdf (253.17 KB)
soft computing
Witte, R., "Fuzzy Belief Revision", 9th International Workshop on Non-Monotonic Reasoning (NMR 2002), Toulouse, France, pp. 311–320, April 19–21, 2002. Abstract  Download: witte_fuzzybeliefrevision.pdf (131.43 KB)
SMW
Sateli, B., and R. Witte, "Semantic MediaWiki (SMW) for Scientific Literature Management", The 9th Semantic MediaWiki Conference (SMWCon Spring 2014), Montréal, Canada, 05/2014. Abstract  Download: zeeva-smwcon14-talk.pdf (1.07 MB)
Witte, R., and B. Sateli, "Adding Natural Language Processing Support to your (Semantic) MediaWiki", The 9th Semantic MediaWiki Conference (SMWCon Spring 2014), Montreal, Canada, 05/2014.  Download: wiki-nlp-tutorial-smwcon2014.pdf (3.1 MB)
semantic Wiki
Sateli, B., and R. Witte, "Semantic MediaWiki (SMW) for Scientific Literature Management", The 9th Semantic MediaWiki Conference (SMWCon Spring 2014), Montréal, Canada, 05/2014. Abstract  Download: zeeva-smwcon14-talk.pdf (1.07 MB)
Witte, R., and B. Sateli, "Adding Natural Language Processing Support to your (Semantic) MediaWiki", The 9th Semantic MediaWiki Conference (SMWCon Spring 2014), Montreal, Canada, 05/2014.  Download: wiki-nlp-tutorial-smwcon2014.pdf (3.1 MB)
Sateli, B., and R. Witte, "Collaborative Semantic Management and Automated Analysis of Scientific Literature", The 11th Extended Semantic Web Conference (ESWC 2014), vol. 8798, Anissaras, Crete, Greece : Springer, pp. 494-498, 05/2014. Abstract  Download: zeeva-eswc14.pdf (311.49 KB)
Sateli, B., E. Angius, S. S. Rajivelu, and R. Witte, "Can Text Mining Assistants Help to Improve Requirements Specifications?", Mining Unstructured Data (MUD 2012), Kingston, Ontario, Canada, October 17, 2012. Abstract  Download: mud2012-ReqWiki.pdf (375.44 KB)
Witte, R., R. Krestel, T. Kappler, and P. C. Lockemann, "Converting a Historical Architecture Encyclopedia into a Semantic Knowledge Base", IEEE Intelligent Systems, vol. 25, no. 1, Los Alamitos, CA, USA : IEEE Computer Society, pp. 58--66, January/February, 2010. Abstract  Download: ieee-is-durm.pdf (1.61 MB)
Semantic Web Portal
Löffler, F., B. Sateli, B. König-Ries, and R. Witte, "Semantic Content Processing in Web Portals", 4th Canadian Semantic Web Symposium (CSWS 2013), vol. 1054, Montréal, QC, Canada : CEUR-WS.org, pp. 50–51, 07/2013. Abstract  Download: paper-12.pdf (217.15 KB)
Semantic Web
Specht, G., H. Gamper, and F. Klan (Eds.), Löffler, F., B. Sateli, R. Witte, and B. König-Ries, "Towards Semantic Recommendation of Biodiversity Datasets based on Linked Open Data", The 26th GI-Workshop on Foundations of Databases (Grundlagen von Datenbanken), vol. 1313, Bozen, Italy : CEUR-WS.org, pp. 65–70, 10/2014. Abstract  Download: Loeffler_GvDB2014.pdf (1.68 MB)