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Semantic Software Lab
Concordia University
Montréal, Canada

Bioinformatics

{Mutation Miner – Textual Annotation of Protein Structures}

Baker, C. J. O., and R. Witte, "{Mutation Miner – Textual Annotation of Protein Structures}", 5th CERMM Annual Symposium, Concordia University, Montréal, Québec, Canada, Centre for Research in Molecular Modeling, pp. 29, February 11–13, 2005.

{Combining Biological Databases and Text Mining to support New Bioinformatics Applications}

Witte, R., and C. J. O. Baker, "{Combining Biological Databases and Text Mining to support New Bioinformatics Applications}", Natural Language Processing and Information Systems: 10th International Conference on Applications of Natural Language to Information Systems (NLDB 2005), vol. 3513, Alicante, Spain, Springer-Verlag, pp. 310–321, June 15–17, 2005.

{Ontology-Based Extraction and Summarization of Protein Mutation Impact Information}

Naderi, N., and R. Witte, "{Ontology-Based Extraction and Summarization of Protein Mutation Impact Information}", Proceedings of the 2010 Workshop on Biomedical Natural Language Processing (BioNLP 2010), Uppsala, Sweden, Association for Computational Linguistics (ACL), pp. 128--129, July 15, 2010.

Mutation Miner

In the Mutation Miner project we investigate the combination of NLP, ontologies, and bioinformatics tools for enzyme biotechnologists.

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