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Semantic Software Lab
Concordia University
Montréal, Canada

Bioinformatics

Empowering the Enzyme Biotechnologist with Ontologies

Baker, C. J. O., A. Shaban-Nejad, R. Witte, V. Haarslev, and G. Butler, "Empowering the Enzyme Biotechnologist with Ontologies", 10th International Congress on Biotechnology in the Pulp and Paper Industry (ICBPPI 2007), Monona Terrace, Madison, Wisconsin, USA, June 10–14, 2007.

Ontology Design for Biomedical Text Mining

Baker, C. J. O., and K. - H. Cheung (Eds.), Witte, R., T. Kappler, and C. J. O. Baker, "Ontology Design for Biomedical Text Mining", Semantic Web: Revolutionizing Knowledge Discovery in the Life Sciences, New York, NY, USA : Springer Science+Business Media, pp. 281–313, 2007.

Assessment of NER solutions against the first and second CALBC silver standard corpus

Rebholz-Schuhmann, D., A. Jimeno-Yepes, C. Li, S. Kafkas, I. Lewin, N. Kang, P. Corbett, D. Milward, E. Buyko, E. Beisswanger, et al., "Assessment of NER solutions against the first and second CALBC silver standard corpus", Proceedings of the Fourth International Symposium for Semantic Mining in Biomedicine, vol. 714, Cambridge, United Kingdom, 10/2010.

Mutation Miner – Textual Annotation of Protein Structures

Baker, C. J. O., and R. Witte, "Mutation Miner – Textual Annotation of Protein Structures", 5th CERMM Annual Symposium, Concordia University, Montréal, Québec, Canada : Centre for Research in Molecular Modeling, pp. 29, February 11–13, 2005.
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