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Semantic Software Lab
Concordia University
Montréal, Canada
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Bioinformatics

Mutation Miner – Textual Annotation of Protein Structures

Submitted by rene on Mon, 2010-08-23 08:43
Baker, C. J. O., and R. Witte, "Mutation Miner – Textual Annotation of Protein Structures", 5th CERMM Annual Symposium, Concordia University, Montréal, Québec, Canada : Centre for Research in Molecular Modeling, pp. 29, February 11–13, 2005.
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Combining Biological Databases and Text Mining to support New Bioinformatics Applications

Submitted by rene on Sun, 2010-08-22 09:06
Witte, R., and C. J. O. Baker, "Combining Biological Databases and Text Mining to support New Bioinformatics Applications", Natural Language Processing and Information Systems: 10th International Conference on Applications of Natural Language to Information Systems (NLDB 2005), vol. 3513, Alicante, Spain : Springer-Verlag, pp. 310–321, June 15–17, 2005.
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The FungalWeb Ontology: Application Scenarios

Submitted by rene on Sat, 2010-08-21 08:31
Baker, C. J. O., R. Witte, A. Shaban-Nejad, G. Butler, and V. Haarslev, "The FungalWeb Ontology: Application Scenarios", Eighth Annual Bio-Ontologies Meeting, Detroit, Michigan, USA, pp. 1–2, June 24, 2005.
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Ontology-Based Extraction and Summarization of Protein Mutation Impact Information

Submitted by rene on Fri, 2010-07-23 10:03
Naderi, N., and R. Witte, "Ontology-Based Extraction and Summarization of Protein Mutation Impact Information", Proceedings of the 2010 Workshop on Biomedical Natural Language Processing (BioNLP 2010), Uppsala, Sweden : Association for Computational Linguistics (ACL), pp. 128--129, July 15, 2010.
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Open Mutation Miner (OMM) Project

In the Open Mutation Miner (OMM) project we investigate the combination of NLP, ontologies, and bioinformatics tools for the extraction and analysis of mutations and their impacts from the bibliome.

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